USF1 - Factorbook

This gene encodes a member of the basic helix-loop-helix leucine zipper family, and can function as a cellular transcription factor. The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs. This gene has been linked to familial combined hyperlipidemia (FCHL). Alternative splicing of this gene results in multiple transcript variants. A related pseudogene has been defined on chromosome 21. RefSeq, Feb 2013

Upstream stimulatory factor 1 is a protein that in humans is encoded by the USF1 gene.wikipedia

USF1
PDB 1AN4
PDB	1AN4
ENCODE	experiments
Ensemble	search
Entrez	7391
GO	search
Gene Card	search
HGNC	search
RefSeq	search
UCSC	browse
UniProt	search
Wikipedia	USF1

Average Profiles of Modified Histones around the Summit of ChIP-seq Peaks

A549 - Myers - ENCSR000BHX

A549 - Myers - ENCSR000BJB

A549 - Myers - ENCSR000BPV

GM12878 - Myers - ENCSR000BGI

H1-hESC - Myers - ENCSR000BIU

HCT116 - Myers - ENCSR000BVK

HepG2 - Myers - ENCSR000BGM

K562 - Myers - ENCSR000BKT

SK-N-SH - Myers - ENCSR000BMF

SK-N-SH - Myers - ENCSR000BTZ

Legend

Proximal:

H2AFZ
H3K27ac
H3K27me3
H3K36me3
H3K4me1
H3K4me2
H3K4me3
H3K79me2
H3K9ac
H3K9me1
H3K9me3
H4K20me1

Distal:

H2AFZ
H3K27ac
H3K27me3
H3K36me3
H3K4me1
H3K4me2
H3K4me3
H3K79me2
H3K9ac
H3K9me1
H3K9me3
H4K20me1

Notes

Average histone modification profiles are shown for the [-2 kb, +2 kb] window around the summits of TF ChIP-seq peaks. Profile are shown separately for peaks that are proximal ([-1 kb, +1 kb]; ending in '-p') to an annotated transcript start site (TSS) and for peaks that are distal (>1 kb; ending in '-d') to all annotated TSS. TSS-proximal profiles are arranged such that the nearest transcript proceeds towards the right.

Motifs Enriched in the Top 500 ChIP-seq Peaks

A549 - Myers - ENCSR000BHX

1. 499 / 500 3.7e-1014 GGTCACGTGGCCG		p-value: 0.00 pct_center: 0.47 pct_ratio: 5.16
2. 43 / 500 4.9e-249 AGCTGCAAGGGAGGCTGGGAAATGTAGTCT		p-value: 0.00 pct_center: 0.14 pct_ratio: 0.77
3. 41 / 500 5.6e-130 AGTTCTGGCCAATGGGATGTGAGCAGAAG		p-value: 0.00 pct_center: 0.14 pct_ratio: 0.92
4. 122 / 500 2.2e-61 GGTCACGTGAC		p-value: 0.00 pct_center: 0.41 pct_ratio: 2.71
5. 76 / 500 2.8e-44 CTTGGCCAATCAGAG		p-value: 0.00 pct_center: 0.15 pct_ratio: 1.43

MEME output

A549 - Myers - ENCSR000BPV

1. 497 / 500 5.5e-1032 GGTCACGTGACCCGG		p-value: 0.00 pct_center: 0.58 pct_ratio: 4.60
2. 41 / 500 1.5e-227 CTGCAAGGGATGCTGGGAAATGTAGTCTT		p-value: 0.00 pct_center: 0.16 pct_ratio: 0.81
3. 39 / 500 2.6e-93 TCTGGCCAATGGGATGTGAGCAGAAGTGA		p-value: 0.00 pct_center: 0.20 pct_ratio: 0.94
4. 117 / 500 1.5e-57 GTCACGTG		p-value: 0.00 pct_center: 0.48 pct_ratio: 4.84
5. 82 / 500 4.7e-27 CTCTGATTGGCTGAG		p-value: 0.00 pct_center: 0.16 pct_ratio: 1.64

MEME output

A549 - Myers - ENCSR000BJB

1. 500 / 500 5.8e-1039 GGTCACGTGGCCGGG		p-value: 0.00 pct_center: 0.63 pct_ratio: 5.16
2. 34 / 500 4.0e-185 TAGCCGCAAGGGAGGCTGGGAAATGTAGTC		p-value: 0.00 pct_center: 0.17 pct_ratio: 0.86
3. 31 / 500 3.4e-115 TTCTGGCCAATGGGATGTGAGCAGAAGT		p-value: 0.00 pct_center: 0.16 pct_ratio: 0.97
4. 120 / 500 4.1e-56 GGGTCACGTGA		p-value: 0.00 pct_center: 0.49 pct_ratio: 2.96
5. 72 / 500 1.4e-31 CTCTGATTGGCTGG		p-value: 0.00 pct_center: 0.18 pct_ratio: 1.78

MEME output

Notes

The top 500 TF ChIP-seq peaks were used to identify enriched motifs de novo, using the MEME-ChIP suite of tools. Up to five motifs are reported (1 to 5) if they meet the criteria defined by our pipeline.

GM12878 - Myers - ENCSR000BGI

1. 499 / 500 3.6e-1063 GGTCACGTGGCGGGG		p-value: 0.00 pct_center: 0.74 pct_ratio: 4.69
2. 100 / 500 4.2e-59 GGTCACGTGAC		p-value: 0.00 pct_center: 0.56 pct_ratio: 3.19
3. 22 / 500 5.4e-59 AGGGACGCTGGGAATTGTAGT		p-value: 0.00 pct_center: 0.21 pct_ratio: 0.65
4. 64 / 500 5.8e-28 CGGCCAATGGGAG		p-value: 0.00 pct_center: 0.16 pct_ratio: 1.77
5. 43 / 500 3.4e-22 AACATGGCGGC		p-value: 0.00 pct_center: 0.11 pct_ratio: 0.60

MEME output

Notes

H1-hESC - Myers - ENCSR000BIU

1. 498 / 500 1.0e-1041 CGGGGCCACGTGACC		p-value: 0.00 pct_center: 0.76 pct_ratio: 6.35
2. 79 / 500 2.2e-590 GCTGCAAGGGAGGCTGGGAAATGTAGTCT		p-value: 0.00 pct_center: 0.18 pct_ratio: 0.68
3. 64 / 500 1.8e-239 AGTTCTGGCCAATGGGATGTGAGCAGAAGT		p-value: 0.00 pct_center: 0.18 pct_ratio: 1.11
4. 119 / 500 7.5e-65 GTCACGTG		p-value: 0.00 pct_center: 0.65 pct_ratio: 6.89
5. 100 / 500 7.7e-58 TTGGCCAATCAGAG		p-value: 0.00 pct_center: 0.21 pct_ratio: 2.01

MEME output

Notes

HCT116 - Myers - ENCSR000BVK

1. 288 / 500 5.7e-508 TAGGTGTGGTCACGTGACT		p-value: 0.00 pct_center: 0.81 pct_ratio: 4.75
2. 81 / 500 5.1e-413 GGAGGCTGGGAAATGTAGTCT		p-value: 0.00 pct_center: 0.24 pct_ratio: 0.96
3. 107 / 500 1.1e-268 GTTCTGGCCAATGGGATGTGA		p-value: 0.00 pct_center: 0.26 pct_ratio: 1.41
4. 61 / 500 8.4e-30 TCTGATTGGCT		p-value: 0.00 pct_center: 0.25 pct_ratio: 2.15
5. 29 / 500 1.3e-15 TGATGTGTGTCACTTCCAGGTCAAGGCCTT		p-value: 0.00 pct_center: 0.11 pct_ratio: 0.84

MEME output

Notes

HepG2 - Myers - ENCSR000BGM

1. 498 / 500 9.7e-1032 GGTCACGTGGCCG		p-value: 0.00 pct_center: 0.70 pct_ratio: 5.78
2. 44 / 500 3.2e-256 TGCAAGGGATGCTGGGAAATGTAGTCTTT		p-value: 0.00 pct_center: 0.16 pct_ratio: 0.73
3. 41 / 500 7.2e-133 GTTCTGGCCAATGGGATGTGAGCAGAAGT		p-value: 0.00 pct_center: 0.15 pct_ratio: 0.89
4. 99 / 500 3.7e-47 GGTCACGTGAC		p-value: 0.00 pct_center: 0.61 pct_ratio: 3.47
5. 80 / 500 1.2e-28 CTCTGATTGGCCGAG		p-value: 0.00 pct_center: 0.14 pct_ratio: 1.57

MEME output

Notes

Ishikawa - Myers - ENCSR000BSX

1. 245 / 500 5.8e-361 GGTCACGTGAC		p-value: 0.00 pct_center: 0.66 pct_ratio: 3.89
2. 25 / 500 8.7e-78 GGATGCTGGGAAATGTAGTCT		p-value: 0.00 pct_center: 0.18 pct_ratio: 0.81
3. 53 / 500 4.2e-34 AGGTGAAGCCAATGGAATAAAAGAAAAAGA		p-value: 0.00 pct_center: 0.18 pct_ratio: 0.44
4. 29 / 500 7.6e-12 AACATGGCGGC		p-value: 0.00 pct_center: 0.09 pct_ratio: 0.64
5. 37 / 500 8.7e-11 GGCGGCGGCGGAGGCGGCGGG		p-value: 0.00 pct_center: 0.54 pct_ratio: 0.55

MEME output

Notes

K562 - Myers - ENCSR000BKT

1. 497 / 500 5.7e-977 GGTCACGTGGCCGGG		p-value: 0.00 pct_center: 0.70 pct_ratio: 5.25
2. 58 / 500 7.9e-320 GGGAGGCTGGGAAATGTAGTCTT		p-value: 0.00 pct_center: 0.16 pct_ratio: 0.72
3. 49 / 500 5.0e-177 AGTTCTGGCCAATGGGATGTGAGCAGAAG		p-value: 0.00 pct_center: 0.18 pct_ratio: 1.14
4. 119 / 500 1.6e-64 GTCACGTG		p-value: 0.00 pct_center: 0.60 pct_ratio: 6.13
5. 109 / 500 7.1e-60 CTGGCCAATCAGAGG		p-value: 0.00 pct_center: 0.21 pct_ratio: 2.21

MEME output

Notes

SK-N-SH - Myers - ENCSR000BTZ

1. 209 / 500 2.8e-287 GGTCACGTGA		p-value: 0.00 pct_center: 0.79 pct_ratio: 4.46
2. 16 / 500 7.1e-39 GGCAGGCTGGGAAATGTAGTCTT		p-value: 0.02 pct_center: 0.30 pct_ratio: 0.71
3. 34 / 500 3.4e-27 AAAGAGAAGAAAAGAGAAAAAGAGAAAAA		p-value: 0.36 pct_center: 0.10 pct_ratio: 0.30
4. 37 / 500 2.8e-19 AAGATGGCGGC		p-value: 0.00 pct_center: 0.16 pct_ratio: 0.78
5. 103 / 500 9.5e-11 GGGGCGGGGCC		p-value: 0.00 pct_center: 0.63 pct_ratio: 0.61

MEME output

SK-N-SH - Myers - ENCSR000BMF

1. 496 / 500 3.1e-1052 GGTCACGTGGCCGGG		p-value: 0.00 pct_center: 0.64 pct_ratio: 4.54
2. 24 / 500 2.7e-102 CCGCAAGGGATGCTGGGAAATGTAGTCTT		p-value: 0.00 pct_center: 0.20 pct_ratio: 0.71
3. 108 / 500 5.4e-61 GGTCACGTGAC		p-value: 0.00 pct_center: 0.55 pct_ratio: 4.05
4. 113 / 500 2.0e-54 CCGGCCAATCGGAG		p-value: 0.00 pct_center: 0.19 pct_ratio: 2.13
5. 132 / 500 1.1e-21 GGGGGCGGGGC		p-value: 0.00 pct_center: 0.41 pct_ratio: 0.61

MEME output

Notes

Binding of other histone marks at USF1 peaks

A549 - Myers - ENCSR000BHX

A549 Myers USF1 ENCSR000BHX r=1.00
A549 Myers USF1 ENCSR000BJB r=0.79
A549 Myers USF1 ENCSR000BPV r=0.74
A549 Myers H2AFZ ENCSR000AUG r=0.37
A549 Myers H2AFZ ENCSR000AUH r=0.35
A549 Myers H3K4me3 ENCSR000ASH r=0.33
A549 Myers H3K4me3 ENCSR000AST r=0.32
A549 Myers H3K4me3 ENCSR000DPD r=0.31
A549 Myers H3K27ac ENCSR000AVF r=0.30
A549 Myers H3K9ac ENCSR000ASV r=0.30
A549 Myers H3K4me2 ENCSR000AVI r=0.29
A549 Myers H3K4me2 ENCSR000ATO r=0.27
A549 Myers H3K27ac ENCSR000AUI r=0.26
A549 Myers H3K4me1 ENCSR000AUM r=0.09
A549 Myers H3K4me1 ENCSR000AVH r=0.08
A549 Myers H3K79me2 ENCSR000ATP r=0.04
A549 Myers H3K79me2 ENCSR000ASU r=0.03
A549 Myers H4K20me1 ENCSR000AUO r=0.02
A549 Myers H3K27me3 ENCSR000AUK r=-0.01
A549 Myers H3K9me3 ENCSR000AUN r=-0.02
A549 Myers H3K36me3 ENCSR000AUL r=-0.03
A549 Myers H3K36me3 ENCSR000AVG r=-0.03
A549 Myers H3K27me3 ENCSR000AUJ r=-0.04

10,000 randomly-selected peaks from a total of 11,980 (download )

A549 - Myers - ENCSR000BJB

A549 Myers USF1 ENCSR000BJB r=1.00
A549 Myers USF1 ENCSR000BHX r=0.81
A549 Myers USF1 ENCSR000BPV r=0.77
A549 Myers H2AFZ ENCSR000AUG r=0.35
A549 Myers H2AFZ ENCSR000AUH r=0.33
A549 Myers H3K4me3 ENCSR000ASH r=0.31
A549 Myers H3K4me3 ENCSR000AST r=0.30
A549 Myers H3K4me3 ENCSR000DPD r=0.29
A549 Myers H3K27ac ENCSR000AVF r=0.27
A549 Myers H3K9ac ENCSR000ASV r=0.27
A549 Myers H3K4me2 ENCSR000AVI r=0.25
A549 Myers H3K4me2 ENCSR000ATO r=0.24
A549 Myers H3K27ac ENCSR000AUI r=0.24
A549 Myers H3K4me1 ENCSR000AUM r=0.06
A549 Myers H3K4me1 ENCSR000AVH r=0.06
A549 Myers H3K79me2 ENCSR000ATP r=0.03
A549 Myers H3K79me2 ENCSR000ASU r=0.03
A549 Myers H4K20me1 ENCSR000AUO r=-0.00
A549 Myers H3K9me3 ENCSR000AUN r=-0.02
A549 Myers H3K27me3 ENCSR000AUK r=-0.02
A549 Myers H3K36me3 ENCSR000AUL r=-0.03
A549 Myers H3K36me3 ENCSR000AVG r=-0.03
A549 Myers H3K27me3 ENCSR000AUJ r=-0.04

10,000 randomly-selected peaks from a total of 11,932 (download )

A549 - Myers - ENCSR000BPV

A549 Myers USF1 ENCSR000BPV r=1.00
A549 Myers USF1 ENCSR000BJB r=0.82
A549 Myers USF1 ENCSR000BHX r=0.80
A549 Myers H2AFZ ENCSR000AUG r=0.36
A549 Myers H2AFZ ENCSR000AUH r=0.34
A549 Myers H3K4me3 ENCSR000ASH r=0.32
A549 Myers H3K4me3 ENCSR000AST r=0.31
A549 Myers H3K4me3 ENCSR000DPD r=0.31
A549 Myers H3K9ac ENCSR000ASV r=0.27
A549 Myers H3K27ac ENCSR000AVF r=0.26
A549 Myers H3K4me2 ENCSR000AVI r=0.25
A549 Myers H3K4me2 ENCSR000ATO r=0.23
A549 Myers H3K27ac ENCSR000AUI r=0.20
A549 Myers H3K79me2 ENCSR000ATP r=0.03
A549 Myers H3K79me2 ENCSR000ASU r=0.03
A549 Myers H3K4me1 ENCSR000AUM r=0.03
A549 Myers H3K4me1 ENCSR000AVH r=0.02
A549 Myers H4K20me1 ENCSR000AUO r=0.01
A549 Myers H3K27me3 ENCSR000AUK r=-0.01
A549 Myers H3K9me3 ENCSR000AUN r=-0.03
A549 Myers H3K27me3 ENCSR000AUJ r=-0.03
A549 Myers H3K36me3 ENCSR000AUL r=-0.04
A549 Myers H3K36me3 ENCSR000AVG r=-0.04

8,004 peaks (download )

GM12878 - Myers - ENCSR000BGI

GM12878 Myers USF1 ENCSR000BGI r=1.00
GM12878 Myers H2AFZ ENCSR000AOV r=0.35
GM12878 Myers H3K9ac ENCSR000AKH r=0.27
GM12878 Myers H3K4me3 ENCSR000DRY r=0.25
GM12878 Myers H3K4me3 ENCSR000AKA r=0.22
GM12878 Myers H3K4me2 ENCSR000AKG r=0.20
GM12878 Myers H3K27ac ENCSR000AKC r=0.18
GM12878 Myers H3K79me2 ENCSR000AOW r=0.09
GM12878 Myers H3K4me1 ENCSR000AKF r=0.05
GM12878 Myers H3K9me3 ENCSR000AOX r=0.02
GM12878 Myers H4K20me1 ENCSR000AKI r=-0.03
GM12878 Myers H3K27me3 ENCSR000AKD r=-0.03
GM12878 Myers H3K36me3 ENCSR000DRW r=-0.03
GM12878 Myers H3K27me3 ENCSR000DRX r=-0.04
GM12878 Myers H3K36me3 ENCSR000AKE r=-0.08

9,778 peaks (download )

H1-hESC - Myers - ENCSR000BIU

H1-hESC Myers USF1 ENCSR000BIU r=1.00
H1-hESC Myers H3K4me2 ENCSR000ANC r=0.24
H1-hESC Myers H3K4me3 ENCSR000AMG r=0.23
H1-hESC Myers H3K9ac ENCSR000AND r=0.23
H1-hESC Myers H2AFZ ENCSR000APX r=0.23
H1-hESC Myers H3K27ac ENCSR000ANP r=0.21
H1-hESC Myers H3K4me1 ENCSR000ANA r=0.15
H1-hESC Myers H3K27me3 ENCSR000ALU r=0.04
H1-hESC Myers H4K20me1 ENCSR000AMH r=0.02
H1-hESC Myers H3K9me3 ENCSR000APZ r=0.02
H1-hESC Myers H3K79me2 ENCSR000APY r=0.01
H1-hESC Myers H3K36me3 ENCSR000ANB r=-0.01

10,000 randomly-selected peaks from a total of 26,042 (download )

HCT116 - Myers - ENCSR000BVK

HCT116 Myers USF1 ENCSR000BVK r=1.00
HCT116 Myers H3K4me3 ENCSR000DTQ r=0.38
HCT116 Myers H3K27ac ENCSR000EUT r=0.33
HCT116 Myers H3K4me1 ENCSR000EUS r=0.19

3,483 peaks (download )

HepG2 - Myers - ENCSR000BGM

HepG2 Myers USF1 ENCSR000BGM r=1.00
HepG2 Myers H3K4me3 ENCSR000AMP r=0.23
HepG2 Myers H3K4me2 ENCSR000AMC r=0.22
HepG2 Myers H3K9ac ENCSR000AMD r=0.22
HepG2 Myers H2AFZ ENCSR000AOK r=0.21
HepG2 Myers H3K27ac ENCSR000AMO r=0.21
HepG2 Myers H3K4me3 ENCSR000DUF r=0.20
HepG2 Myers H3K4me1 ENCSR000APV r=0.11
HepG2 Myers H3K27me3 ENCSR000AOL r=0.07
HepG2 Myers H3K79me2 ENCSR000AOM r=0.06
HepG2 Myers H4K20me1 ENCSR000AMQ r=0.02
HepG2 Myers H3K27me3 ENCSR000DUE r=0.01
HepG2 Myers H3K9me3 ENCSR000ATD r=0.01
HepG2 Myers H3K36me3 ENCSR000DUD r=0.01
HepG2 Myers H3K36me3 ENCSR000AMB r=-0.01

10,000 randomly-selected peaks from a total of 21,890 (download )

Ishikawa - Myers - ENCSR000BSX

Ishikawa Myers USF1 ENCSR000BSX r=1.00

10,000 randomly-selected peaks from a total of 10,255 (download )

K562 - Myers - ENCSR000BKT

K562 Myers USF1 ENCSR000BKT r=1.00
K562 Myers H2AFZ ENCSR000APC r=0.32
K562 Myers H3K4me2 ENCSR000AKT r=0.27
K562 Myers H3K4me3 ENCSR000AKU r=0.26
K562 Myers H3K27ac ENCSR000AKP r=0.26
K562 Myers H3K9ac ENCSR000AKV r=0.24
K562 Myers H3K9ac ENCSR000EVZ r=0.23
K562 Myers H3K4me3 ENCSR000DWD r=0.22
K562 Myers H3K4me3 ENCSR000EWA r=0.22
K562 Myers H3K4me1 ENCSR000EWC r=0.16
K562 Myers H3K4me1 ENCSR000AKS r=0.16
K562 Myers H3K79me2 ENCSR000APD r=0.08
K562 Myers H3K9me3 ENCSR000APE r=0.08
K562 Myers H3K9me1 ENCSR000AKW r=0.07
K562 Myers H4K20me1 ENCSR000AKX r=0.05
K562 Myers H3K36me3 ENCSR000AKR r=0.02
K562 Myers H3K27me3 ENCSR000AKQ r=0.00
K562 Myers H3K27me3 ENCSR000DWC r=0.00
K562 Myers H3K36me3 ENCSR000DWB r=-0.01
K562 Myers H3K27me3 ENCSR000EWB r=-0.03

10,000 randomly-selected peaks from a total of 18,521 (download )

SK-N-SH - Myers - ENCSR000BMF

SK-N-SH Myers USF1 ENCSR000BMF r=1.00
SK-N-SH Myers USF1 ENCSR000BTZ r=0.64
SK-N-SH Myers H3K4me3 ENCSR000DXR r=0.27
SK-N-SH Myers H3K27me3 ENCSR000DXP r=-0.00
SK-N-SH Myers H3K36me3 ENCSR000DXO r=-0.03

10,000 randomly-selected peaks from a total of 19,622 (download )

SK-N-SH - Myers - ENCSR000BTZ

SK-N-SH Myers USF1 ENCSR000BTZ r=1.00
SK-N-SH Myers USF1 ENCSR000BMF r=0.87
SK-N-SH Myers H3K4me3 ENCSR000DXR r=0.45
SK-N-SH Myers H3K27me3 ENCSR000DXP r=-0.02
SK-N-SH Myers H3K36me3 ENCSR000DXO r=-0.09

2,225 peaks (download )

Notes

ChIP-seq peaks (left to right in the heatmap) for the current TF are sorted by descending TF ChIP-seq signal. The ChIP-seq signals of histone modifications are plotted for the genomic regions that correspond to the peaks of the current TF in the same order. The Pearson correlation coefficient (r) of the histone modification ChIP-seq signal with the TF ChIP-seq signal is shown.

Binding of other TFs at USF1 peaks

A549 - Myers - ENCSR000BHX

A549 Myers USF1 ENCSR000BHX r=1.00
A549 Myers USF1 ENCSR000BJB r=0.79
A549 Myers USF1 ENCSR000BPV r=0.74
A549 Myers MAX ENCSR000DYG r=0.56
A549 Myers MAX ENCSR000BTJ r=0.50
A549 Myers BHLHE40 ENCSR000DYJ r=0.46
A549 Myers SP1 ENCSR000BPE r=0.42
A549 Myers MYC ENCSR000DYC r=0.41
A549 Myers CREB1 ENCSR000BRB r=0.40
A549 Myers E2F6 ENCSR000BTC r=0.38
A549 Myers SIX5 ENCSR000BRL r=0.33
A549 Myers PBX3 ENCSR000BTN r=0.33
A549 Myers TEAD4 ENCSR000BUD r=0.33
A549 Myers YY1 ENCSR000BPM r=0.32
A549 Myers ETS1 ENCSR000BPU r=0.31
A549 Myers SIN3A ENCSR000BRM r=0.30
A549 Myers GATA3 ENCSR000BTI r=0.30
A549 Myers NR3C1 ENCSR000BJR r=0.29
A549 Myers ZBTB33 ENCSR000BPZ r=0.29
A549 Myers RAD21 ENCSR000DYE r=0.29
A549 Myers POLR2A ENCSR000DMZ r=0.29
A549 Myers CEBPB ENCSR000BUB r=0.29
A549 Myers CEBPB ENCSR000DYI r=0.28
A549 Myers POLR2A ENCSR000BHI r=0.27
A549 Myers GABPA ENCSR000BPY r=0.27
A549 Myers NR3C1 ENCSR000BHF r=0.27
A549 Myers POLR2A ENCSR000BHH r=0.27
A549 Myers FOSL2 ENCSR000BQO r=0.27
A549 Myers TAF1 ENCSR000BPF r=0.27
A549 Myers JUND ENCSR000BRF r=0.26
A549 Myers RAD21 ENCSR000BUC r=0.26
A549 Myers TCF12 ENCSR000BQQ r=0.25
A549 Myers REST ENCSR000BQP r=0.25
A549 Myers FOXA2 ENCSR000BRE r=0.25
A549 Myers ELF1 ENCSR000BPT r=0.25
A549 Myers ATF3 ENCSR000BPS r=0.24
A549 Myers CTCF ENCSR000DYD r=0.23
A549 Myers NR3C1 ENCSR000BHG r=0.22
A549 Myers NR3C1 ENCSR000BHE r=0.22
A549 Myers BCL3 ENCSR000BQH r=0.22
A549 Myers EP300 ENCSR000BPW r=0.20
A549 Myers CTCF ENCSR000DNA r=0.20
A549 Myers FOXA1 ENCSR000BPX r=0.18
A549 Myers CTCF ENCSR000BHV r=0.18
A549 Myers CTCF ENCSR000BHW r=0.16
A549 Myers CTCF ENCSR000AUF r=0.16
A549 Myers CTCF ENCSR000AUE r=0.14
A549 Myers CTCF ENCSR000DPF r=0.11

10,000 randomly-selected peaks from a total of 11,980 (download )

A549 - Myers - ENCSR000BJB

A549 Myers USF1 ENCSR000BJB r=1.00
A549 Myers USF1 ENCSR000BHX r=0.81
A549 Myers USF1 ENCSR000BPV r=0.77
A549 Myers MAX ENCSR000DYG r=0.52
A549 Myers MAX ENCSR000BTJ r=0.44
A549 Myers BHLHE40 ENCSR000DYJ r=0.42
A549 Myers MYC ENCSR000DYC r=0.36
A549 Myers E2F6 ENCSR000BTC r=0.34
A549 Myers SP1 ENCSR000BPE r=0.34
A549 Myers CREB1 ENCSR000BRB r=0.33
A549 Myers POLR2A ENCSR000DMZ r=0.27
A549 Myers SIX5 ENCSR000BRL r=0.27
A549 Myers YY1 ENCSR000BPM r=0.27
A549 Myers PBX3 ENCSR000BTN r=0.26
A549 Myers POLR2A ENCSR000BHI r=0.25
A549 Myers POLR2A ENCSR000BHH r=0.25
A549 Myers ETS1 ENCSR000BPU r=0.25
A549 Myers TEAD4 ENCSR000BUD r=0.24
A549 Myers SIN3A ENCSR000BRM r=0.24
A549 Myers TAF1 ENCSR000BPF r=0.23
A549 Myers RAD21 ENCSR000DYE r=0.23
A549 Myers GATA3 ENCSR000BTI r=0.23
A549 Myers NR3C1 ENCSR000BJR r=0.22
A549 Myers GABPA ENCSR000BPY r=0.22
A549 Myers ZBTB33 ENCSR000BPZ r=0.22
A549 Myers CEBPB ENCSR000DYI r=0.21
A549 Myers CEBPB ENCSR000BUB r=0.21
A549 Myers ELF1 ENCSR000BPT r=0.21
A549 Myers RAD21 ENCSR000BUC r=0.20
A549 Myers CTCF ENCSR000DYD r=0.20
A549 Myers REST ENCSR000BQP r=0.19
A549 Myers FOXA2 ENCSR000BRE r=0.19
A549 Myers FOSL2 ENCSR000BQO r=0.19
A549 Myers JUND ENCSR000BRF r=0.18
A549 Myers TCF12 ENCSR000BQQ r=0.18
A549 Myers ATF3 ENCSR000BPS r=0.17
A549 Myers NR3C1 ENCSR000BHF r=0.17
A549 Myers CTCF ENCSR000DNA r=0.16
A549 Myers BCL3 ENCSR000BQH r=0.14
A549 Myers NR3C1 ENCSR000BHE r=0.14
A549 Myers CTCF ENCSR000BHV r=0.13
A549 Myers EP300 ENCSR000BPW r=0.13
A549 Myers CTCF ENCSR000AUF r=0.13
A549 Myers CTCF ENCSR000BHW r=0.13
A549 Myers NR3C1 ENCSR000BHG r=0.11
A549 Myers CTCF ENCSR000AUE r=0.11
A549 Myers FOXA1 ENCSR000BPX r=0.09
A549 Myers CTCF ENCSR000DPF r=0.09

10,000 randomly-selected peaks from a total of 11,932 (download )

A549 - Myers - ENCSR000BPV

A549 Myers USF1 ENCSR000BPV r=1.00
A549 Myers USF1 ENCSR000BJB r=0.82
A549 Myers USF1 ENCSR000BHX r=0.80
A549 Myers MAX ENCSR000DYG r=0.54
A549 Myers BHLHE40 ENCSR000DYJ r=0.43
A549 Myers MAX ENCSR000BTJ r=0.42
A549 Myers MYC ENCSR000DYC r=0.35
A549 Myers E2F6 ENCSR000BTC r=0.35
A549 Myers CREB1 ENCSR000BRB r=0.33
A549 Myers POLR2A ENCSR000DMZ r=0.31
A549 Myers SP1 ENCSR000BPE r=0.28
A549 Myers SIX5 ENCSR000BRL r=0.27
A549 Myers YY1 ENCSR000BPM r=0.27
A549 Myers POLR2A ENCSR000BHI r=0.27
A549 Myers POLR2A ENCSR000BHH r=0.26
A549 Myers TAF1 ENCSR000BPF r=0.24
A549 Myers PBX3 ENCSR000BTN r=0.24
A549 Myers ETS1 ENCSR000BPU r=0.23
A549 Myers SIN3A ENCSR000BRM r=0.23
A549 Myers RAD21 ENCSR000DYE r=0.21
A549 Myers ELF1 ENCSR000BPT r=0.21
A549 Myers GABPA ENCSR000BPY r=0.20
A549 Myers TEAD4 ENCSR000BUD r=0.20
A549 Myers CTCF ENCSR000DYD r=0.19
A549 Myers REST ENCSR000BQP r=0.18
A549 Myers GATA3 ENCSR000BTI r=0.18
A549 Myers NR3C1 ENCSR000BJR r=0.18
A549 Myers ZBTB33 ENCSR000BPZ r=0.17
A549 Myers CEBPB ENCSR000DYI r=0.16
A549 Myers RAD21 ENCSR000BUC r=0.16
A549 Myers CTCF ENCSR000DNA r=0.16
A549 Myers CEBPB ENCSR000BUB r=0.14
A549 Myers TCF12 ENCSR000BQQ r=0.14
A549 Myers FOXA2 ENCSR000BRE r=0.13
A549 Myers JUND ENCSR000BRF r=0.13
A549 Myers CTCF ENCSR000AUF r=0.12
A549 Myers FOSL2 ENCSR000BQO r=0.12
A549 Myers CTCF ENCSR000BHV r=0.11
A549 Myers CTCF ENCSR000AUE r=0.11
A549 Myers ATF3 ENCSR000BPS r=0.11
A549 Myers NR3C1 ENCSR000BHE r=0.10
A549 Myers BCL3 ENCSR000BQH r=0.10
A549 Myers CTCF ENCSR000BHW r=0.10
A549 Myers NR3C1 ENCSR000BHF r=0.10
A549 Myers CTCF ENCSR000DPF r=0.09
A549 Myers EP300 ENCSR000BPW r=0.06
A549 Myers NR3C1 ENCSR000BHG r=0.06
A549 Myers FOXA1 ENCSR000BPX r=0.04

8,004 peaks (download )

GM12878 - Myers - ENCSR000BGI

GM12878 Myers USF1 ENCSR000BGI r=1.00
GM12878 Myers USF2 ENCSR000DZU r=0.74
GM12878 Myers NFE2 ENCSR000DZY r=0.65
GM12878 Myers MAX ENCSR000DZF r=0.47
GM12878 Myers FOS ENCSR000EYZ r=0.45
GM12878 Myers BHLHE40 ENCSR000DZJ r=0.44
GM12878 Myers MXI1 ENCSR000DZI r=0.37
GM12878 Myers ATF3 ENCSR000BJY r=0.36
GM12878 Myers CREB1 ENCSR000BUF r=0.33
GM12878 Myers STAT1 ENCSR000DZM r=0.33
GM12878 Myers MYC ENCSR000DKU r=0.32
GM12878 Myers SIN3A ENCSR000DYX r=0.31
GM12878 Myers TBL1XR1 ENCSR000DYZ r=0.31
GM12878 Myers ELF1 ENCSR000BMB r=0.30
GM12878 Myers ELK1 ENCSR000DZB r=0.30
GM12878 Myers NRF1 ENCSR000DZO r=0.29
GM12878 Myers EGR1 ENCSR000BRG r=0.28
GM12878 Myers RCOR1 ENCSR000DZC r=0.28
GM12878 Myers POLR2A ENCSR000DKT r=0.28
GM12878 Myers PAX5 ENCSR000BHD r=0.28
GM12878 Myers SREBF1 ENCSR000DYU r=0.27
GM12878 Myers YY1 ENCSR000BNP r=0.27
GM12878 Myers POLR2A ENCSR000BGD r=0.27
GM12878 Myers RFX5 ENCSR000DZW r=0.26
GM12878 Myers EP300 ENCSR000DZD r=0.25
GM12878 Myers TCF3 ENCSR000BQT r=0.25
GM12878 Myers JUND ENCSR000DYS r=0.25
GM12878 Myers E2F4 ENCSR000DYY r=0.25
GM12878 Myers RUNX3 ENCSR000BRI r=0.25
GM12878 Myers NFYB ENCSR000DNM r=0.25
GM12878 Myers EP300 ENCSR000DZG r=0.25
GM12878 Myers POLR2A ENCSR000EYW r=0.24
GM12878 Myers ESRRA ENCSR000DYQ r=0.24
GM12878 Myers TCF12 ENCSR000BGZ r=0.24
GM12878 Myers POLR2A ENCSR000EAD r=0.24
GM12878 Myers ZNF143 ENCSR000DZL r=0.24
GM12878 Myers BRCA1 ENCSR000DZS r=0.23
GM12878 Myers SP1 ENCSR000BHK r=0.22
GM12878 Myers IRF3 ENCSR000DZX r=0.22
GM12878 Myers SIX5 ENCSR000BJE r=0.22
GM12878 Myers MAFK ENCSR000DYV r=0.22
GM12878 Myers PML ENCSR000BQM r=0.21
GM12878 Myers TBP ENCSR000DZZ r=0.21
GM12878 Myers ETS1 ENCSR000BKA r=0.21
GM12878 Myers SREBF2 ENCSR000DYT r=0.21
GM12878 Myers EGR1 ENCSR000BMQ r=0.21
GM12878 Myers NFYA ENCSR000DNN r=0.20
GM12878 Myers GABPA ENCSR000BGC r=0.20
GM12878 Myers RELA ENCSR000EAG r=0.19
GM12878 Myers CHD1 ENCSR000DZE r=0.18
GM12878 Myers SRF ENCSR000BGE r=0.18
GM12878 Myers POU2F2 ENCSR000BGP r=0.18
GM12878 Myers ATF2 ENCSR000BQK r=0.18
GM12878 Myers NFIC ENCSR000BRN r=0.18
GM12878 Myers BCL3 ENCSR000BNQ r=0.17
GM12878 Myers FOXM1 ENCSR000BRU r=0.17
GM12878 Myers CUX1 ENCSR000DYR r=0.17
GM12878 Myers SMC3 ENCSR000DZP r=0.17
GM12878 Myers STAT3 ENCSR000DZV r=0.17
GM12878 Myers TAF1 ENCSR000BGS r=0.17
GM12878 Myers SRF ENCSR000BMI r=0.16
GM12878 Myers PAX5 ENCSR000BHJ r=0.15
GM12878 Myers WRNIP1 ENCSR000EAA r=0.15
GM12878 Myers CTCF ENCSR000DZN r=0.15
GM12878 Myers ZNF384 ENCSR000DYP r=0.15
GM12878 Myers RAD21 ENCSR000EAC r=0.15
GM12878 Myers EBF1 ENCSR000DZQ r=0.14
GM12878 Myers KAT2A ENCSR000DNO r=0.13
GM12878 Myers CEBPB ENCSR000BRX r=0.13
GM12878 Myers IRF4 ENCSR000BGY r=0.12
GM12878 Myers CTCF ENCSR000DKV r=0.12
GM12878 Myers MEF2A ENCSR000BKB r=0.12
GM12878 Myers NR2C2 ENCSR000EUL r=0.11
GM12878 Myers PBX3 ENCSR000BGR r=0.11
GM12878 Myers EP300 ENCSR000BHB r=0.11
GM12878 Myers NFATC1 ENCSR000BQL r=0.11
GM12878 Myers ZBTB33 ENCSR000BHC r=0.11
GM12878 Myers CTCF ENCSR000AKB r=0.11
GM12878 Myers RXRA ENCSR000BJD r=0.11
GM12878 Myers REST ENCSR000BGF r=0.10
GM12878 Myers STAT5A ENCSR000BQZ r=0.10
GM12878 Myers EBF1 ENCSR000BGU r=0.10
GM12878 Myers ZEB1 ENCSR000BND r=0.09
GM12878 Myers CTCF ENCSR000DRZ r=0.09
GM12878 Myers BCL11A ENCSR000BHA r=0.09
GM12878 Myers POLR3G ENCSR000EYU r=0.08
GM12878 Myers SUPT20H ENCSR000DNP r=0.08
GM12878 Myers MTA3 ENCSR000BRH r=0.08
GM12878 Myers RAD21 ENCSR000BMY r=0.07
GM12878 Myers SPI1 ENCSR000BGQ r=0.06
GM12878 Myers MEF2C ENCSR000BNG r=0.06
GM12878 Myers REST ENCSR000BQS r=0.06
GM12878 Myers BATF ENCSR000BGT r=0.05
GM12878 Myers YY1 ENCSR000EUM r=0.04
GM12878 Myers IKZF1 ENCSR000EUJ r=0.04
GM12878 Myers JUND ENCSR000EYV r=0.02
GM12878 Myers ZZZ3 ENCSR000DNQ r=0.01
GM12878 Myers EZH2 ENCSR000ARD r=-0.01
GM12878 Myers ZNF274 ENCSR000EUK r=-0.09

9,778 peaks (download )

H1-hESC - Myers - ENCSR000BIU

H1-hESC Myers USF1 ENCSR000BIU r=1.00
H1-hESC Myers USF2 ENCSR000ECD r=0.77
H1-hESC Myers MAX ENCSR000EUP r=0.51
H1-hESC Myers MAX ENCSR000BSJ r=0.41
H1-hESC Myers MYC ENCSR000EBY r=0.35
H1-hESC Myers MXI1 ENCSR000EBR r=0.34
H1-hESC Myers ATF3 ENCSR000BKC r=0.33
H1-hESC Myers E2F6 ENCSR000BSI r=0.33
H1-hESC Myers ZNF143 ENCSR000EBW r=0.30
H1-hESC Myers CREB1 ENCSR000BSN r=0.29
H1-hESC Myers JUND ENCSR000EBZ r=0.29
H1-hESC Myers SIN3A ENCSR000EBO r=0.28
H1-hESC Myers CEBPB ENCSR000EBV r=0.25
H1-hESC Myers BRCA1 ENCSR000EBX r=0.25
H1-hESC Myers TEAD4 ENCSR000BRY r=0.24
H1-hESC Myers TBP ENCSR000ECB r=0.24
H1-hESC Myers BACH1 ENCSR000EBQ r=0.22
H1-hESC Myers CTBP2 ENCSR000EUO r=0.22
H1-hESC Myers NRF1 ENCSR000ECC r=0.22
H1-hESC Myers JUN ENCSR000ECA r=0.22
H1-hESC Myers CHD7 ENCSR000AVA r=0.22
H1-hESC Myers HDAC2 ENCSR000AVB r=0.22
H1-hESC Myers EP300 ENCSR000AUQ r=0.21
H1-hESC Myers POLR2A ENCSR000DLJ r=0.21
H1-hESC Myers SP1 ENCSR000BIR r=0.21
H1-hESC Myers RAD21 ENCSR000ECE r=0.21
H1-hESC Myers YY1 ENCSR000BKD r=0.20
H1-hESC Myers MAFK ENCSR000EBS r=0.20
H1-hESC Myers RFX5 ENCSR000ECF r=0.20
H1-hESC Myers RBBP5 ENCSR000AQC r=0.20
H1-hESC Myers TAF1 ENCSR000BHO r=0.19
H1-hESC Myers CTCF ENCSR000AMF r=0.18
H1-hESC Myers CTCF ENCSR000DLK r=0.18
H1-hESC Myers SIRT6 ENCSR000AUS r=0.17
H1-hESC Myers SAP30 ENCSR000ATR r=0.17
H1-hESC Myers SIX5 ENCSR000BIQ r=0.16
H1-hESC Myers SIN3A ENCSR000BIS r=0.16
H1-hESC Myers PHF8 ENCSR000ATK r=0.16
H1-hESC Myers KDM4A ENCSR000AVC r=0.16
H1-hESC Myers POLR2A ENCSR000BHN r=0.16
H1-hESC Myers SP4 ENCSR000BQV r=0.15
H1-hESC Myers CTCF ENCSR000BNH r=0.15
H1-hESC Myers GABPA ENCSR000BIW r=0.15
H1-hESC Myers ATF2 ENCSR000BQU r=0.15
H1-hESC Myers RAD21 ENCSR000BLD r=0.15
H1-hESC Myers KDM5A ENCSR000AQL r=0.14
H1-hESC Myers SUZ12 ENCSR000ATS r=0.14
H1-hESC Myers HDAC6 ENCSR000ATQ r=0.14
H1-hESC Myers CHD1 ENCSR000EBU r=0.12
H1-hESC Myers JUND ENCSR000BKP r=0.12
H1-hESC Myers MYC ENCSR000DLI r=0.11
H1-hESC Myers EGR1 ENCSR000BJA r=0.10
H1-hESC Myers TCF12 ENCSR000BIT r=0.10
H1-hESC Myers HDAC2 ENCSR000BNR r=0.10
H1-hESC Myers EP300 ENCSR000BKK r=0.09
H1-hESC Myers SRF ENCSR000BIV r=0.09
H1-hESC Myers SP2 ENCSR000BQG r=0.08
H1-hESC Myers KDM5B ENCSR000AUR r=0.08
H1-hESC Myers EZH2 ENCSR000ASY r=0.08
H1-hESC Myers SUZ12 ENCSR000EUQ r=0.08
H1-hESC Myers TAF7 ENCSR000BLU r=0.08
H1-hESC Myers FOSL1 ENCSR000BNS r=0.07
H1-hESC Myers NANOG ENCSR000BMT r=0.06
H1-hESC Myers CHD1 ENCSR000AQK r=0.05
H1-hESC Myers BCL11A ENCSR000BMJ r=0.05
H1-hESC Myers RXRA ENCSR000BJW r=0.05
H1-hESC Myers BCL11A ENCSR000BIP r=0.05
H1-hESC Myers REST ENCSR000BHM r=0.05
H1-hESC Myers ZNF274 ENCSR000EUN r=0.01

10,000 randomly-selected peaks from a total of 26,042 (download )

HCT116 - Myers - ENCSR000BVK

HCT116 Myers USF1 ENCSR000BVK r=1.00
HCT116 Myers MAX ENCSR000BSH r=0.72
HCT116 Myers SP1 ENCSR000BSF r=0.71
HCT116 Myers CBX3 ENCSR000BUH r=0.66
HCT116 Myers ELF1 ENCSR000BVH r=0.63
HCT116 Myers SIN3A ENCSR000BSG r=0.62
HCT116 Myers SRF ENCSR000BSC r=0.61
HCT116 Myers JUND ENCSR000BSA r=0.59
HCT116 Myers ATF3 ENCSR000BUG r=0.58
HCT116 Myers CEBPB ENCSR000BSD r=0.57
HCT116 Myers EGR1 ENCSR000BRZ r=0.55
HCT116 Myers FOSL1 ENCSR000BTE r=0.52
HCT116 Myers TEAD4 ENCSR000BVJ r=0.51
HCT116 Myers TCF7L2 ENCSR000EUV r=0.51
HCT116 Myers RAD21 ENCSR000BSB r=0.49
HCT116 Myers POLR2A ENCSR000EUU r=0.46
HCT116 Myers REST ENCSR000BVI r=0.35
HCT116 Myers CTCF ENCSR000BSE r=0.32
HCT116 Myers ZBTB33 ENCSR000BNY r=0.31
HCT116 Myers YY1 ENCSR000BNX r=0.30
HCT116 Myers CTCF ENCSR000DTO r=0.19

3,483 peaks (download )

HepG2 - Myers - ENCSR000BGM

HepG2 Myers USF1 ENCSR000BGM r=1.00
HepG2 Myers USF2 ENCSR000EEF r=0.77
HepG2 Myers MAX ENCSR000EDS r=0.46
HepG2 Myers BHLHE40 ENCSR000EDT r=0.45
HepG2 Myers MAX ENCSR000BTM r=0.38
HepG2 Myers MXI1 ENCSR000EDU r=0.35
HepG2 Myers CREB1 ENCSR000BVL r=0.32
HepG2 Myers MYC ENCSR000DLR r=0.32
HepG2 Myers ATF3 ENCSR000BKE r=0.31
HepG2 Myers SREBF1 ENCSR000EEO r=0.29
HepG2 Myers EP300 ENCSR000EDV r=0.29
HepG2 Myers RCOR1 ENCSR000EDQ r=0.29
HepG2 Myers HNF4A ENCSR000EEU r=0.29
HepG2 Myers NR2F2 ENCSR000BVM r=0.28
HepG2 Myers ARID3A ENCSR000EDP r=0.27
HepG2 Myers ZEB1 ENCSR000BVN r=0.27
HepG2 Myers ELF1 ENCSR000BMZ r=0.26
HepG2 Myers SP1 ENCSR000BJX r=0.26
HepG2 Myers CEBPB ENCSR000EEX r=0.26
HepG2 Myers HSF1 ENCSR000EET r=0.25
HepG2 Myers BRCA1 ENCSR000EDY r=0.24
HepG2 Myers JUND ENCSR000EEI r=0.24
HepG2 Myers HDAC2 ENCSR000BMC r=0.24
HepG2 Myers MAFF ENCSR000EEC r=0.23
HepG2 Myers RFX5 ENCSR000EEA r=0.23
HepG2 Myers YY1 ENCSR000BNT r=0.23
HepG2 Myers JUND ENCSR000BGK r=0.22
HepG2 Myers MAFK ENCSR000EDZ r=0.22
HepG2 Myers NFIC ENCSR000BQX r=0.22
HepG2 Myers EP300 ENCSR000BLW r=0.22
HepG2 Myers HNF4G ENCSR000BNJ r=0.22
HepG2 Myers MAFK ENCSR000EEB r=0.21
HepG2 Myers ESRRA ENCSR000EEW r=0.21
HepG2 Myers SMC3 ENCSR000EDW r=0.21
HepG2 Myers MYBL2 ENCSR000BRO r=0.21
HepG2 Myers POLR2A ENCSR000EEP r=0.21
HepG2 Myers TBP ENCSR000EEL r=0.21
HepG2 Myers FOSL2 ENCSR000BHP r=0.20
HepG2 Myers CEBPB ENCSR000EEE r=0.20
HepG2 Myers TCF12 ENCSR000BJG r=0.20
HepG2 Myers SIN3A ENCSR000BGL r=0.20
HepG2 Myers POLR2A ENCSR000EEM r=0.20
HepG2 Myers BHLHE40 ENCSR000BID r=0.20
HepG2 Myers TAF1 ENCSR000BJN r=0.20
HepG2 Myers RAD21 ENCSR000EEG r=0.19
HepG2 Myers POLR2A ENCSR000BJM r=0.19
HepG2 Myers NR2C2 ENCSR000EVS r=0.19
HepG2 Myers POLR2A ENCSR000DLQ r=0.19
HepG2 Myers HNF4A ENCSR000BLF r=0.18
HepG2 Myers FOXA1 ENCSR000BLE r=0.18
HepG2 Myers TEAD4 ENCSR000BRP r=0.18
HepG2 Myers MBD4 ENCSR000BQW r=0.17
HepG2 Myers POLR2A ENCSR000EZQ r=0.17
HepG2 Myers FOXA1 ENCSR000BMO r=0.16
HepG2 Myers NR3C1 ENCSR000EEV r=0.16
HepG2 Myers RAD21 ENCSR000BLS r=0.16
HepG2 Myers SREBF1 ENCSR000EZP r=0.16
HepG2 Myers JUN ENCSR000EEK r=0.16
HepG2 Myers CEBPD ENCSR000BQJ r=0.15
HepG2 Myers SREBF2 ENCSR000EZO r=0.14
HepG2 Myers IRF3 ENCSR000EEJ r=0.13
HepG2 Myers CTCF ENCSR000BIE r=0.13
HepG2 Myers CTCF ENCSR000DLS r=0.12
HepG2 Myers REST ENCSR000BOT r=0.12
HepG2 Myers CTCF ENCSR000AMA r=0.12
HepG2 Myers RXRA ENCSR000BHU r=0.11
HepG2 Myers CTCF ENCSR000DUG r=0.11
HepG2 Myers SRF ENCSR000BLV r=0.11
HepG2 Myers ZBTB7A ENCSR000BQA r=0.11
HepG2 Myers NRF1 ENCSR000EEH r=0.11
HepG2 Myers CEBPB ENCSR000BQI r=0.10
HepG2 Myers REST ENCSR000BJL r=0.10
HepG2 Myers SP2 ENCSR000BOU r=0.07
HepG2 Myers TCF7L2 ENCSR000EVQ r=0.07
HepG2 Myers ZBTB33 ENCSR000BHR r=0.06
HepG2 Myers ZBTB33 ENCSR000BNA r=0.06
HepG2 Myers FOXA2 ENCSR000BNI r=0.06
HepG2 Myers EZH2 ENCSR000ARI r=0.04
HepG2 Myers GABPA ENCSR000BJK r=0.04
HepG2 Myers ZNF274 ENCSR000EVR r=0.01

10,000 randomly-selected peaks from a total of 21,890 (download )

Ishikawa - Myers - ENCSR000BSX

Ishikawa Myers USF1 ENCSR000BSX r=1.00
Ishikawa Myers MAX ENCSR000BTY r=0.52
Ishikawa Myers YY1 ENCSR000BSY r=0.40
Ishikawa Myers TCF12 ENCSR000BUV r=0.40
Ishikawa Myers SRF ENCSR000BTD r=0.39
Ishikawa Myers TAF1 ENCSR000BTO r=0.38
Ishikawa Myers TEAD4 ENCSR000BSW r=0.38
Ishikawa Myers EP300 ENCSR000BUE r=0.35
Ishikawa Myers CREB1 ENCSR000BUR r=0.35
Ishikawa Myers CEBPB ENCSR000BTT r=0.34
Ishikawa Myers EGR1 ENCSR000BSQ r=0.33
Ishikawa Myers NFIC ENCSR000BUT r=0.32
Ishikawa Myers FOXM1 ENCSR000BUS r=0.31
Ishikawa Myers RAD21 ENCSR000BTU r=0.30
Ishikawa Myers POLR2A ENCSR000BKI r=0.27
Ishikawa Myers ZBTB7A ENCSR000BSZ r=0.23
Ishikawa Myers NR3C1 ENCSR000BJC r=0.18
Ishikawa Myers REST ENCSR000BUU r=0.14
Ishikawa Myers ESR1 ENCSR000BQR r=0.13
Ishikawa Myers ESR1 ENCSR000BIY r=0.13
Ishikawa Myers ESR1 ENCSR000BKL r=0.10
Ishikawa Myers CTCF ENCSR000BQE r=0.09
Ishikawa Myers FOXA1 ENCSR000BKW r=0.06

10,000 randomly-selected peaks from a total of 10,255 (download )

K562 - Myers - ENCSR000BKT

K562 Myers USF1 ENCSR000BKT r=1.00
K562 Myers USF2 ENCSR000EHG r=0.65
K562 Myers MAX ENCSR000FAE r=0.57
K562 Myers ATF3 ENCSR000BNU r=0.54
K562 Myers BHLHE40 ENCSR000EGV r=0.52
K562 Myers MAX ENCSR000EFV r=0.52
K562 Myers MYC ENCSR000EZU r=0.43
K562 Myers JUN ENCSR000EFS r=0.43
K562 Myers MAX ENCSR000BLP r=0.43
K562 Myers MYC ENCSR000EZV r=0.43
K562 Myers MYC ENCSR000FAG r=0.43
K562 Myers MYC ENCSR000EGS r=0.43
K562 Myers ATF3 ENCSR000DOG r=0.43
K562 Myers MYC ENCSR000FAZ r=0.42
K562 Myers FOS ENCSR000FAI r=0.42
K562 Myers MYC ENCSR000EGJ r=0.41
K562 Myers NFE2 ENCSR000FAF r=0.41
K562 Myers JUN ENCSR000FAH r=0.40
K562 Myers RCOR1 ENCSR000EGG r=0.39
K562 Myers IRF1 ENCSR000EGT r=0.39
K562 Myers JUND ENCSR000EGN r=0.39
K562 Myers ATF1 ENCSR000DNZ r=0.38
K562 Myers JUN ENCSR000EGH r=0.37
K562 Myers MYC ENCSR000DLZ r=0.37
K562 Myers E2F6 ENCSR000EWJ r=0.36
K562 Myers MXI1 ENCSR000EGZ r=0.35
K562 Myers CBX3 ENCSR000BRT r=0.35
K562 Myers NFYA ENCSR000EGR r=0.34
K562 Myers STAT2 ENCSR000FAT r=0.34
K562 Myers EP300 ENCSR000EGE r=0.34
K562 Myers E2F4 ENCSR000EWL r=0.34
K562 Myers TBL1XR1 ENCSR000EGB r=0.34
K562 Myers HCFC1 ENCSR000EFN r=0.34
K562 Myers STAT1 ENCSR000EHJ r=0.33
K562 Myers IRF1 ENCSR000EGL r=0.32
K562 Myers IRF1 ENCSR000EGK r=0.32
K562 Myers CREB1 ENCSR000BSO r=0.32
K562 Myers NFYB ENCSR000EGQ r=0.32
K562 Myers SIRT6 ENCSR000DOH r=0.32
K562 Myers CCNT2 ENCSR000DOA r=0.31
K562 Myers TBL1XR1 ENCSR000EGA r=0.31
K562 Myers ZMIZ1 ENCSR000EFQ r=0.31
K562 Myers JUN ENCSR000EZT r=0.31
K562 Myers STAT1 ENCSR000FAU r=0.30
K562 Myers TRIM28 ENCSR000BRW r=0.30
K562 Myers RCOR1 ENCSR000EGC r=0.30
K562 Myers SETDB1 ENCSR000AUT r=0.30
K562 Myers JUN ENCSR000EZX r=0.30
K562 Myers STAT1 ENCSR000EHK r=0.30
K562 Myers STAT1 ENCSR000FAV r=0.29
K562 Myers ZNF143 ENCSR000EGP r=0.29
K562 Myers GATA1 ENCSR000EFT r=0.29
K562 Myers HMGN3 ENCSR000DOB r=0.29
K562 Myers STAT2 ENCSR000FBC r=0.29
K562 Myers ARID3A ENCSR000EFY r=0.28
K562 Myers ZNF384 ENCSR000EFP r=0.27
K562 Myers ELK1 ENCSR000EFU r=0.27
K562 Myers MAFK ENCSR000EGX r=0.27
K562 Myers JUN ENCSR000EZW r=0.27
K562 Myers SMC3 ENCSR000EGW r=0.26
K562 Myers TBP ENCSR000EHA r=0.26
K562 Myers NR2F2 ENCSR000BRS r=0.26
K562 Myers EGR1 ENCSR000BNE r=0.25
K562 Myers POLR2A ENCSR000DLY r=0.25
K562 Myers SETDB1 ENCSR000EWI r=0.25
K562 Myers STAT5A ENCSR000BRR r=0.25
K562 Myers CUX1 ENCSR000EFO r=0.25
K562 Myers CEBPD ENCSR000BVY r=0.25
K562 Myers ELF1 ENCSR000BMD r=0.25
K562 Myers TEAD4 ENCSR000BRK r=0.25
K562 Myers E2F6 ENCSR000BLI r=0.24
K562 Myers POLR2A ENCSR000FAY r=0.24
K562 Myers YY1 ENCSR000BKU r=0.24
K562 Myers EP300 ENCSR000EGY r=0.24
K562 Myers POLR2A ENCSR000FAX r=0.24
K562 Myers EP300 ENCSR000AQB r=0.24
K562 Myers POLR2A ENCSR000FAW r=0.24
K562 Myers HDAC1 ENCSR000AQF r=0.24
K562 Myers POLR2A ENCSR000FAJ r=0.24
K562 Myers GTF2B ENCSR000DOE r=0.24
K562 Myers POLR2A ENCSR000EHP r=0.24
K562 Myers IRF1 ENCSR000EGU r=0.24
K562 Myers CEBPB ENCSR000BRQ r=0.23
K562 Myers KAT2B ENCSR000ATZ r=0.23
K562 Myers CHD7 ENCSR000AVD r=0.23
K562 Myers GATA2 ENCSR000EWG r=0.23
K562 Myers POLR2A ENCSR000EHL r=0.22
K562 Myers SAP30 ENCSR000AQJ r=0.22
K562 Myers CTCF ENCSR000EGM r=0.22
K562 Myers HDAC2 ENCSR000AQG r=0.22
K562 Myers KDM1A ENCSR000ATX r=0.22
K562 Myers YY1 ENCSR000EWF r=0.21
K562 Myers MAFF ENCSR000EGI r=0.21
K562 Myers GATA1 ENCSR000EWM r=0.21
K562 Myers CEBPB ENCSR000EHE r=0.21
K562 Myers TAF1 ENCSR000BKS r=0.21
K562 Myers BACH1 ENCSR000EGD r=0.20
K562 Myers ETS1 ENCSR000BKQ r=0.20
K562 Myers POLR2A ENCSR000BMR r=0.20
K562 Myers KDM5B ENCSR000AQA r=0.20
K562 Myers NRF1 ENCSR000EHH r=0.20
K562 Myers TAL1 ENCSR000EHB r=0.20
K562 Myers RBBP5 ENCSR000AQI r=0.19
K562 Myers RAD21 ENCSR000FAD r=0.19
K562 Myers HDAC6 ENCSR000ATJ r=0.19
K562 Myers RFX5 ENCSR000EGO r=0.19
K562 Myers GABPA ENCSR000BLO r=0.19
K562 Myers CBX3 ENCSR000ATV r=0.19
K562 Myers REST ENCSR000BMW r=0.19
K562 Myers WHSC1 ENCSR000AVE r=0.19
K562 Myers PML ENCSR000BQY r=0.18
K562 Myers GTF3C2 ENCSR000DOD r=0.18
K562 Myers SRF ENCSR000BLK r=0.18
K562 Myers SMARCA4 ENCSR000EHO r=0.17
K562 Myers HDAC2 ENCSR000BMG r=0.17
K562 Myers CTCF ENCSR000DMA r=0.17
K562 Myers SMARCB1 ENCSR000EHN r=0.17
K562 Myers GATA2 ENCSR000BKM r=0.17
K562 Myers CTCF ENCSR000AKO r=0.17
K562 Myers NCOR1 ENCSR000ATY r=0.17
K562 Myers FOSL1 ENCSR000BMV r=0.16
K562 Myers BRF2 ENCSR000DOC r=0.16
K562 Myers SIN3A ENCSR000BLR r=0.16
K562 Myers CTCF ENCSR000DWE r=0.16
K562 Myers CTCF ENCSR000BPJ r=0.15
K562 Myers TRIM28 ENCSR000EVY r=0.15
K562 Myers ZNF263 ENCSR000EWN r=0.15
K562 Myers RNF2 ENCSR000AUA r=0.15
K562 Myers PHF8 ENCSR000AQH r=0.15
K562 Myers SPI1 ENCSR000BGW r=0.15
K562 Myers THAP1 ENCSR000BNN r=0.15
K562 Myers SIX5 ENCSR000BGX r=0.14
K562 Myers ZNF274 ENCSR000EVX r=0.14
K562 Myers SETDB1 ENCSR000EWD r=0.14
K562 Myers EZH2 ENCSR000AQE r=0.14
K562 Myers SP1 ENCSR000BKO r=0.14
K562 Myers YY1 ENCSR000BMH r=0.14
K562 Myers XRCC4 ENCSR000FAC r=0.13
K562 Myers SIRT6 ENCSR000AUB r=0.13
K562 Myers MEF2A ENCSR000BNV r=0.13
K562 Myers SP2 ENCSR000BNL r=0.13
K562 Myers CREBBP ENCSR000ATT r=0.12
K562 Myers RAD21 ENCSR000BKV r=0.12
K562 Myers CTCFL ENCSR000BNK r=0.12
K562 Myers SIX5 ENCSR000BNW r=0.12
K562 Myers ZBTB7A ENCSR000BME r=0.12
K562 Myers CHD4 ENCSR000ATL r=0.11
K562 Myers BDP1 ENCSR000DOK r=0.10
K562 Myers TAF7 ENCSR000BNM r=0.09
K562 Myers REST ENCSR000ATM r=0.09
K562 Myers SUZ12 ENCSR000AUC r=0.09
K562 Myers UBTF ENCSR000EFZ r=0.09
K562 Myers POLR3A ENCSR000DOI r=0.08
K562 Myers ZBTB33 ENCSR000BKF r=0.08
K562 Myers POLR3G ENCSR000EHQ r=0.08
K562 Myers UBTF ENCSR000EFW r=0.07
K562 Myers NR2C2 ENCSR000EWH r=0.07
K562 Myers BRF1 ENCSR000DOJ r=0.07
K562 Myers CHD1 ENCSR000AQD r=0.06
K562 Myers CBX8 ENCSR000ATW r=0.02
K562 Myers CBX2 ENCSR000ATU r=0.02
K562 Myers ZNF274 ENCSR000EWE r=-0.01

10,000 randomly-selected peaks from a total of 18,521 (download )

SK-N-SH - Myers - ENCSR000BMF

SK-N-SH Myers USF1 ENCSR000BMF r=1.00
SK-N-SH Myers USF1 ENCSR000BTZ r=0.64
SK-N-SH Myers MAX ENCSR000BVD r=0.42
SK-N-SH Myers MXI1 ENCSR000EIA r=0.39
SK-N-SH Myers RFX5 ENCSR000EHY r=0.35
SK-N-SH Myers ELF1 ENCSR000BTA r=0.32
SK-N-SH Myers JUND ENCSR000EIB r=0.31
SK-N-SH Myers EP300 ENCSR000EHV r=0.31
SK-N-SH Myers EP300 ENCSR000BUA r=0.29
SK-N-SH Myers NRF1 ENCSR000EHZ r=0.29
SK-N-SH Myers TCF12 ENCSR000BSL r=0.28
SK-N-SH Myers ZBTB33 ENCSR000BTS r=0.28
SK-N-SH Myers NFIC ENCSR000BSV r=0.27
SK-N-SH Myers JUND ENCSR000BSK r=0.26
SK-N-SH Myers PBX3 ENCSR000BVE r=0.25
SK-N-SH Myers SMC3 ENCSR000EHW r=0.25
SK-N-SH Myers RXRA ENCSR000BVG r=0.25
SK-N-SH Myers GABPA ENCSR000BTG r=0.25
SK-N-SH Myers FOSL2 ENCSR000BVB r=0.25
SK-N-SH Myers YY1 ENCSR000BLZ r=0.25
SK-N-SH Myers MEF2A ENCSR000BVC r=0.24
SK-N-SH Myers RAD21 ENCSR000EHX r=0.23
SK-N-SH Myers YY1 ENCSR000BSM r=0.23
SK-N-SH Myers TEAD4 ENCSR000BUQ r=0.23
SK-N-SH Myers GATA3 ENCSR000BTH r=0.22
SK-N-SH Myers EP300 ENCSR000BMA r=0.21
SK-N-SH Myers FOXM1 ENCSR000BTB r=0.20
SK-N-SH Myers CTCF ENCSR000EIC r=0.19
SK-N-SH Myers RAD21 ENCSR000BLY r=0.18
SK-N-SH Myers SIN3A ENCSR000BPB r=0.16
SK-N-SH Myers TAF1 ENCSR000BQF r=0.16
SK-N-SH Myers REST ENCSR000BJJ r=0.15
SK-N-SH Myers REST ENCSR000BOZ r=0.15
SK-N-SH Myers CTCF ENCSR000DXQ r=0.14
SK-N-SH Myers CTCF ENCSR000BLX r=0.11

10,000 randomly-selected peaks from a total of 19,622 (download )

SK-N-SH - Myers - ENCSR000BTZ

SK-N-SH Myers USF1 ENCSR000BTZ r=1.00
SK-N-SH Myers USF1 ENCSR000BMF r=0.87
SK-N-SH Myers MAX ENCSR000BVD r=0.62
SK-N-SH Myers MXI1 ENCSR000EIA r=0.57
SK-N-SH Myers ELF1 ENCSR000BTA r=0.56
SK-N-SH Myers RFX5 ENCSR000EHY r=0.52
SK-N-SH Myers EP300 ENCSR000EHV r=0.51
SK-N-SH Myers EP300 ENCSR000BUA r=0.47
SK-N-SH Myers JUND ENCSR000EIB r=0.45
SK-N-SH Myers ZBTB33 ENCSR000BTS r=0.45
SK-N-SH Myers TCF12 ENCSR000BSL r=0.45
SK-N-SH Myers NRF1 ENCSR000EHZ r=0.44
SK-N-SH Myers GABPA ENCSR000BTG r=0.43
SK-N-SH Myers YY1 ENCSR000BSM r=0.43
SK-N-SH Myers NFIC ENCSR000BSV r=0.43
SK-N-SH Myers JUND ENCSR000BSK r=0.42
SK-N-SH Myers YY1 ENCSR000BLZ r=0.42
SK-N-SH Myers RXRA ENCSR000BVG r=0.41
SK-N-SH Myers MEF2A ENCSR000BVC r=0.40
SK-N-SH Myers TEAD4 ENCSR000BUQ r=0.39
SK-N-SH Myers SMC3 ENCSR000EHW r=0.38
SK-N-SH Myers FOXM1 ENCSR000BTB r=0.37
SK-N-SH Myers PBX3 ENCSR000BVE r=0.37
SK-N-SH Myers FOSL2 ENCSR000BVB r=0.35
SK-N-SH Myers GATA3 ENCSR000BTH r=0.33
SK-N-SH Myers RAD21 ENCSR000EHX r=0.32
SK-N-SH Myers EP300 ENCSR000BMA r=0.31
SK-N-SH Myers TAF1 ENCSR000BQF r=0.31
SK-N-SH Myers CTCF ENCSR000EIC r=0.28
SK-N-SH Myers REST ENCSR000BJJ r=0.26
SK-N-SH Myers SIN3A ENCSR000BPB r=0.25
SK-N-SH Myers RAD21 ENCSR000BLY r=0.23
SK-N-SH Myers REST ENCSR000BOZ r=0.23
SK-N-SH Myers CTCF ENCSR000DXQ r=0.19
SK-N-SH Myers CTCF ENCSR000BLX r=0.13

2,225 peaks (download )

Notes

Peaks (left to right in the heatmap) are sorted by the descending order of [-log10(q-value), -log10(p-value), TF ChIP-seq signal].

Average Profiles of Nucleosomes around the Summit of ChIP-seq Peaks

GM12878 - Myers - ENCSR000BGI

K562 - Myers - ENCSR000BKT

Notes

Average nucleosome occupancy profiles in GM12878 and K562 cells are shown for the [-2 kb, +2 kb] window centered on the summits of the TF ChIP-seq peaks, separately for peaks that are proximal to an annotated transcription start site (red lines) and for peaks that are distal to all annotated transcription start sites (blue lines), as defined in the Histone section.